Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.050 GeneticVariation disease BEFREE While our case suggests that circulating D-2HG is not a reliable marker of IDH mutation in AITL, more cases need to be studied to arrive at a definite conclusion. 26617922 2015
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.390 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.030 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 4311
Gene Symbol: MME
MME
0.100 Biomarker disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.400 GeneticVariation disease BEFREE We report the first case of discordant intracellular and plasma D-2HG levels in a patient with IDH2 R172S mutated AITL. 26617922 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 GeneticVariation disease BEFREE We report the first case of BRAF V600E-positive indeterminate cell tumor in association with angioimmunoblastic T-cell lymphoma. 25787243 2015
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.020 GeneticVariation disease BEFREE We present a rare case of angioimmunoblastic T-cell lymphoma (AITL) and HES with the FIP1L1/PDGFRA gene rearrangement. 28885361 2017
Entrez Id: 81608
Gene Symbol: FIP1L1
FIP1L1
0.010 GeneticVariation disease BEFREE We present a rare case of angioimmunoblastic T-cell lymphoma (AITL) and HES with the FIP1L1/PDGFRA gene rearrangement. 28885361 2017
Entrez Id: 406938
Gene Symbol: MIR146A
MIR146A
0.010 AlteredExpression disease BEFREE We performed genome-wide microRNA (miRNA) profiling on 33 ALK-positive (ALK[+]) ALCLs, 25 ALK-negative (ALK[-]) ALCLs, 9 angioimmunoblastic T-cell lymphomas, 11 peripheral T-cell lymphomas not otherwise specified (PTCLNOS), and normal T cells, and demonstrated that ALCLs express many of the miRNAs that are highly expressed in normal T cells with the prominent exception of miR-146a. 23801630 2013
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.010 Biomarker disease BEFREE We observed that MCs directly synthesized interleukin-6 and thus contribute to the establishment of a pro-inflammatory, Th17 permissive environment in AITL. 20595635 2010
Entrez Id: 604
Gene Symbol: BCL6
BCL6
0.070 Biomarker disease BEFREE We measured the percentage positivity of the T<sub>FH</sub> markers, BCL6 and PD1, in AITL CD4-positive cells to be approximately 26% and 45%, with 12% coexpressing both markers. 29241019 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.010 Biomarker disease BEFREE We measured serum levels of IL-5, IL-10, IL-12, and interferon-gamma (IFN-γ) at diagnosis in AITL and other common subtypes of nodal T-cell lymphoma including peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS), ALK-negative anaplastic large cell lymphoma (ALCL) or ALK-positive ALCL between September 2008 and December 2014. 29100307 2017
Entrez Id: 3567
Gene Symbol: IL5
IL5
0.010 AlteredExpression disease BEFREE We measured serum levels of IL-5, IL-10, IL-12, and interferon-gamma (IFN-γ) at diagnosis in AITL and other common subtypes of nodal T-cell lymphoma including peripheral T-cell lymphoma, not otherwise specified (PTCL-NOS), ALK-negative anaplastic large cell lymphoma (ALCL) or ALK-positive ALCL between September 2008 and December 2014. 29100307 2017
Entrez Id: 643
Gene Symbol: CXCR5
CXCR5
0.010 AlteredExpression disease BEFREE We further hypothesized that the AITL clone itself could be responsible for the preferential accumulation of MCs at sites of infiltration through the synthesis of CXCL-13 and its interaction with the CXCR3 and CXCR5 receptors expressed on MCs. 20595635 2010
Entrez Id: 2833
Gene Symbol: CXCR3
CXCR3
0.010 Biomarker disease BEFREE We further hypothesized that the AITL clone itself could be responsible for the preferential accumulation of MCs at sites of infiltration through the synthesis of CXCL-13 and its interaction with the CXCR3 and CXCR5 receptors expressed on MCs. 20595635 2010
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 Biomarker disease BEFREE We further hypothesized that the AITL clone itself could be responsible for the preferential accumulation of MCs at sites of infiltration through the synthesis of CXCL-13 and its interaction with the CXCR3 and CXCR5 receptors expressed on MCs. 20595635 2010
Entrez Id: 100302234
Gene Symbol: MIR664A
MIR664A
0.010 AlteredExpression disease BEFREE We found miR-34a, miR-146a and miR-193b to be up-regulated, as well as miR-140-3p, let-7g, miR-30b and miR-664 to be down-regulated in AITL to a significant level. 25862860 2015
Entrez Id: 574455
Gene Symbol: MIR193B
MIR193B
0.010 AlteredExpression disease BEFREE We found miR-34a, miR-146a and miR-193b to be up-regulated, as well as miR-140-3p, let-7g, miR-30b and miR-664 to be down-regulated in AITL to a significant level. 25862860 2015
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 Biomarker disease BEFREE We correlated EBV localization with clinicopathologic findings in PTCL-NOS (n = 63) and AITL (n = 26). 24180328 2014
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 Biomarker disease BEFREE We correlated EBV localization with clinicopathologic findings in PTCL-NOS (n = 63) and AITL (n = 26). 24180328 2014
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.020 AlteredExpression disease BEFREE We analyzed PDGFRA expression in four subtypes: angioimmunoblastic T-cell lymphoma (3/8, 37.5%); anaplastic large cell lymphoma (5/7, 71.4%); NK/T-cell lymphoma, nasal type (9/12, 75%); and peripheral T-cell lymphoma, unspecified (PTCLu; 7/23, 30.4%). 18633616 2008
Entrez Id: 114757
Gene Symbol: CYGB
CYGB
0.010 AlteredExpression disease BEFREE We also suggest inferior survival in AITL with the combined expression of SIRT1 and clinical characteristics of high IPI scores, high clinical stage, increased serum LDH, decreased HGB and increased γ-Globulin. 27124741 2016
Entrez Id: 968
Gene Symbol: CD68
CD68
0.010 Biomarker disease BEFREE We also analyzed the infiltration of CD68- and CD163-positive macrophages in tumor tissue of AITL. 29100307 2017
Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
0.010 Biomarker disease BEFREE We aimed to describe the characteristics of children with AILD (autoimmune hepatitis, AIH, and autoimmune sclerosing cholangitis, ASC) focusing on the prevalence and type of biliary abnormalities on initial biopsy to see whether ASC was predictable on histological ground. 31069759 2019